PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0186s0004.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 168aa    MW: 17957.9 Da    PI: 9.1944
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0186s0004.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.88.7e-162876355
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         y GVr +k +g+WvAeIr+p++   r r++lg++ ta  Aa+a++ a   l+g
  Kalax.0186s0004.1.p 28 YNGVRMRK-WGKWVAEIREPRK---RSRIWLGTYKTAVAAARAHDVALFHLRG 76
                         78***999.**********954...5**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.9572784IPR001471AP2/ERF domain
SMARTSM003801.6E-332790IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-292785IPR001471AP2/ERF domain
CDDcd000187.81E-252886No hitNo description
SuperFamilySSF541717.85E-202885IPR016177DNA-binding domain
PfamPF008473.0E-102876IPR001471AP2/ERF domain
PRINTSPR003676.0E-92839IPR001471AP2/ERF domain
PRINTSPR003676.0E-95066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MEDNRSGGGR GSSQSRAVFG AGRAGREYNG VRMRKWGKWV AEIREPRKRS RIWLGTYKTA  60
VAAARAHDVA LFHLRGRSEK LNFPEHFAGR VSVEMSAEEI RRMATAVGAE VDADELGMRR  120
RKAADEPSRC GGAESGEGEG GGVGSARPDL NQLPDLDGSD GDVSGGE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A7e-152584363ATERF1
2gcc_A7e-152584363ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010263467.12e-40PREDICTED: ethylene-responsive transcription factor ERF008-like
SwissprotO221743e-37ERF08_ARATH; Ethylene-responsive transcription factor ERF008
TrEMBLA6XA903e-40A6XA90_VITVI; Drought responsive element binding protein
TrEMBLM5WD733e-40M5WD73_PRUPE; Uncharacterized protein
STRINGVIT_07s0031g00190.t018e-40(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.12e-29cooperatively regulated by ethylene and jasmonate 1